Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101165750Si:ch211-284e13.4. (1154 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
    
 0.986
LOC101168764
Tyrosine-protein kinase receptor.
    
 0.975
LOC101166254
Tyrosine-protein kinase receptor.
    
 0.975
LOC101163560
Tyrosine-protein kinase receptor.
    
 0.974
LOC101173298
Tyrosine-protein kinase receptor.
    
 0.974
pik3r1
Phosphoinositide-3-kinase, regulatory subunit 1 (alpha).
    
 0.967
H2MSU3_ORYLA
Uncharacterized protein.
    
 0.967
pik3r3
Phosphoinositide-3-kinase, regulatory subunit 3b (gamma).
    
 0.967
PIK3CA
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
   
 0.964
LOC101168152
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
   
 0.964
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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