STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101164818Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family. (1252 aa)    
Predicted Functional Partners:
LOC101175519
Uncharacterized protein.
   
 0.999
Brk1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
    
 0.999
LOC101169438
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
  
0.998
LOC101170217
Abl-interactor 1b.
   
 0.997
ABI1
Abl-interactor 1a.
   
 0.997
nckap1
NCK-associated protein 1.
   
 0.996
LOC101159814
NCK associated protein 1 like.
   
 0.996
wasf2
WASP family member 2.
   
 0.993
wasf1
WASP family member 1.
   
 0.993
LOC101160681
WH2 domain-containing protein.
   
 0.992
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.