STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ints8Integrator complex subunit 8. (1000 aa)    
Predicted Functional Partners:
ints5
Integrator complex subunit 5.
    
 0.999
ints1
DUF3677 domain-containing protein.
    
 0.999
ints2
Integrator complex subunit 2.
   
 0.988
ints7
Integrator complex subunit 7.
   
 0.986
ints3
Integrator complex subunit 3.
    
 0.985
ints4
Integrator complex subunit 4.
   
 0.980
ints9
Integrator complex subunit 9.
    
 0.975
ints11
Integrator complex subunit 11.
    
 0.970
ints6
Integrator complex subunit 6.
   
 0.969
ints12
Integrator complex subunit 12.
   
 
 0.938
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.