trmt10b protein (Oryzias latipes) - STRING interaction network

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Score

trmt10b

tRNA methyltransferase 10B. (314 aa)

Predicted Functional Partners:

hsd17b10

0.859

mettl1

0.766

wdr4

0.742

pus3

0.632

pus1

0.625

ftsj1

0.610

trmt6

0.603

ftsj3

0.602

trmt5

0.594

nsun6

0.577

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ftsj1	mettl1	ENSORLP00000032635	ENSORLP00000019022	FtsJ RNA 2'-O-methyltransferase 1.	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.806
ftsj1	nsun6	ENSORLP00000032635	ENSORLP00000037922	FtsJ RNA 2'-O-methyltransferase 1.	NOP2/Sun RNA methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.751
ftsj1	pus1	ENSORLP00000032635	ENSORLP00000013531	FtsJ RNA 2'-O-methyltransferase 1.	Pseudouridine synthase 1.	0.648
ftsj1	pus3	ENSORLP00000032635	ENSORLP00000030679	FtsJ RNA 2'-O-methyltransferase 1.	Pseudouridylate synthase 3.	0.736
ftsj1	trmt10b	ENSORLP00000032635	ENSORLP00000009853	FtsJ RNA 2'-O-methyltransferase 1.	tRNA methyltransferase 10B.	0.610
ftsj1	trmt5	ENSORLP00000032635	ENSORLP00000019703	FtsJ RNA 2'-O-methyltransferase 1.	tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.	0.687
ftsj1	trmt6	ENSORLP00000032635	ENSORLP00000012373	FtsJ RNA 2'-O-methyltransferase 1.	tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.	0.860
ftsj1	wdr4	ENSORLP00000032635	ENSORLP00000025804	FtsJ RNA 2'-O-methyltransferase 1.	tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.	0.786
ftsj3	mettl1	ENSORLP00000007431	ENSORLP00000019022	pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.886
ftsj3	nsun6	ENSORLP00000007431	ENSORLP00000037922	pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	NOP2/Sun RNA methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.978
ftsj3	pus1	ENSORLP00000007431	ENSORLP00000013531	pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	Pseudouridine synthase 1.	0.590
ftsj3	pus3	ENSORLP00000007431	ENSORLP00000030679	pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	Pseudouridylate synthase 3.	0.705
ftsj3	trmt10b	ENSORLP00000007431	ENSORLP00000009853	pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	tRNA methyltransferase 10B.	0.602
ftsj3	trmt5	ENSORLP00000007431	ENSORLP00000019703	pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.	0.482
ftsj3	trmt6	ENSORLP00000007431	ENSORLP00000012373	pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.	0.933
ftsj3	wdr4	ENSORLP00000007431	ENSORLP00000025804	pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.	0.796
hsd17b10	trmt10b	ENSORLP00000032665	ENSORLP00000009853	Hydroxysteroid (17-beta) dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	tRNA methyltransferase 10B.	0.859
mettl1	ftsj1	ENSORLP00000019022	ENSORLP00000032635	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	FtsJ RNA 2'-O-methyltransferase 1.	0.806
mettl1	ftsj3	ENSORLP00000019022	ENSORLP00000007431	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	0.886
mettl1	nsun6	ENSORLP00000019022	ENSORLP00000037922	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	NOP2/Sun RNA methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.649