STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdap1Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily. (361 aa)    
Predicted Functional Partners:
pex19
Peroxisomal biogenesis factor 19.
     
 0.756
pex16
Peroxisomal membrane protein PEX16.
     
 0.749
cldn15
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
    
 0.728
fis1
Fission, mitochondrial 1.
    
 0.728
LOC101174524
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
    
 0.728
abcd3
ATP-binding cassette, sub-family D (ALD), member 3a.
     
 0.703
LOC101168738
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
    
 0.680
eef1g
Eukaryotic translation elongation factor 1 gamma.
      
 0.675
pltp
Phospholipid transfer protein.
   
  
 0.671
pex14
Peroxisomal biogenesis factor 14.
     
 0.667
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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