rnf40 protein (Oryzias latipes) - STRING interaction network

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Score

rnf40

E3 ubiquitin protein ligase. (999 aa)

Predicted Functional Partners:

ube2a

0.985

ube2b

0.985

LOC101155732

0.985

leo1

0.907

rnf20

0.905

cdc73

0.897

paf1

0.888

wac

0.874

LOC101169236

0.874

rps27a

0.865

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101155732	LOC101169236	ENSORLP00000022619	ENSORLP00000028002	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	WW domain-containing protein.	0.568
LOC101155732	cdc73	ENSORLP00000022619	ENSORLP00000034636	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	0.802
LOC101155732	leo1	ENSORLP00000022619	ENSORLP00000003825	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.808
LOC101155732	paf1	ENSORLP00000022619	ENSORLP00000025907	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	PAF1 homolog, Paf1/RNA polymerase II complex component.	0.771
LOC101155732	rnf20	ENSORLP00000022619	ENSORLP00000038092	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	E3 ubiquitin protein ligase.	0.985
LOC101155732	rnf40	ENSORLP00000022619	ENSORLP00000009870	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	E3 ubiquitin protein ligase.	0.985
LOC101155732	rps27a	ENSORLP00000022619	ENSORLP00000038189	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	Ribosomal protein S27a.	0.872
LOC101155732	ube2a	ENSORLP00000022619	ENSORLP00000001134	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-conjugating enzyme E2A (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family.	0.965
LOC101155732	ube2b	ENSORLP00000022619	ENSORLP00000001156	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-conjugating enzyme E2B (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family.	0.965
LOC101155732	wac	ENSORLP00000022619	ENSORLP00000005728	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	WW domain containing adaptor with coiled-coil a.	0.568
LOC101169236	LOC101155732	ENSORLP00000028002	ENSORLP00000022619	WW domain-containing protein.	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	0.568
LOC101169236	cdc73	ENSORLP00000028002	ENSORLP00000034636	WW domain-containing protein.	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	0.607
LOC101169236	leo1	ENSORLP00000028002	ENSORLP00000003825	WW domain-containing protein.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.655
LOC101169236	paf1	ENSORLP00000028002	ENSORLP00000025907	WW domain-containing protein.	PAF1 homolog, Paf1/RNA polymerase II complex component.	0.646
LOC101169236	rnf20	ENSORLP00000028002	ENSORLP00000038092	WW domain-containing protein.	E3 ubiquitin protein ligase.	0.874
LOC101169236	rnf40	ENSORLP00000028002	ENSORLP00000009870	WW domain-containing protein.	E3 ubiquitin protein ligase.	0.874
LOC101169236	rps27a	ENSORLP00000028002	ENSORLP00000038189	WW domain-containing protein.	Ribosomal protein S27a.	0.595
LOC101169236	ube2a	ENSORLP00000028002	ENSORLP00000001134	WW domain-containing protein.	Ubiquitin-conjugating enzyme E2A (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family.	0.568
LOC101169236	ube2b	ENSORLP00000028002	ENSORLP00000001156	WW domain-containing protein.	Ubiquitin-conjugating enzyme E2B (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family.	0.568
cdc73	LOC101155732	ENSORLP00000034636	ENSORLP00000022619	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	0.802