Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mfsd12Major facilitator superfamily domain containing 12a. (477 aa)    
Predicted Functional Partners:
ctns
Cystinosin, lysosomal cystine transporter.
      
 0.757
mfsd6
Major facilitator superfamily domain containing 6a.
      
 0.752
suco
SUN domain-containing protein.
      
 0.728
LOC101157289
Uncharacterized protein.
      
 0.724
ENSORLP00000033333
Proteasome subunit beta.
      
 0.717
mfsd6l
Major facilitator superfamily domain containing 6-like.
      
 0.717
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.712
tmem243
Transmembrane protein 243, mitochondrial b.
      
 0.656
tpcn2
Uncharacterized protein.
   
  
 0.612
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.610
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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