STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd12Major facilitator superfamily domain containing 12a. (477 aa)    
Predicted Functional Partners:
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.666
mfsd6
Major facilitator superfamily domain containing 6a.
      
 0.651
mfsd8
Major facilitator superfamily domain containing 8.
      
 0.560
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.559
LOC101157289
Uncharacterized protein.
      
 0.559
mfsd6l
Major facilitator superfamily domain containing 6-like.
      
 0.559
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.558
tpcn2
Uncharacterized protein.
   
  
 0.558
tyms
Thymidylate synthetase.
    
  0.513
ENSORLP00000033333
Proteasome subunit beta.
      
 0.509
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.