Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mfap3lMicrofibril associated protein 3 like. (410 aa)    
Predicted Functional Partners:
MFAP3
Microfibril associated protein 3.
   
    0.830
mfap1
Microfibril associated protein 1.
      
 0.716
fam204a
Family with sequence similarity 204 member A.
      
 0.714
LOC101167732
Microfibril associated protein 5.
     
 0.613
aadat
Aminoadipate aminotransferase.
      
 0.603
mbip
MAP3K12 binding inhibitory protein 1.
      
 0.599
pak1ip1
PAK1 interacting protein 1.
      
 0.509
fbxo16
F-box protein 16.
   
  
 0.505
c9h22orf39
Si:ch211-51h9.6.
      
 0.498
klhdc3
Kelch domain containing 3.
      
 0.498
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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