mast3 protein (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

mast3

Microtubule associated serine/threonine kinase 3b. (1407 aa)

Predicted Functional Partners:

ENSA

0.620

LOC101170763

0.587

TNPO2

0.587

TNPO2-2

0.587

unc13a

0.586

UNC13A

0.586

med26

0.584

slc35d1

0.584

KCNN1

0.584

nxnl1

0.582

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSA	mast3	ENSORLP00000032875	ENSORLP00000009945	Endosulfine alpha; Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. Belongs to the endosulfine family.	Microtubule associated serine/threonine kinase 3b.	0.620
KCNN1	LOC101170763	ENSORLP00000036930	ENSORLP00000012986	CaMBD domain-containing protein.	Transportin 2 (importin 3, karyopherin beta 2b).	0.587
KCNN1	TNPO2	ENSORLP00000036930	ENSORLP00000014744	CaMBD domain-containing protein.	Transportin 2.	0.587
KCNN1	TNPO2-2	ENSORLP00000036930	ENSORLP00000030906	CaMBD domain-containing protein.	Transportin 2.	0.587
KCNN1	UNC13A	ENSORLP00000036930	ENSORLP00000019046	CaMBD domain-containing protein.	Unc-13 homolog A.	0.592
KCNN1	mast3	ENSORLP00000036930	ENSORLP00000009945	CaMBD domain-containing protein.	Microtubule associated serine/threonine kinase 3b.	0.584
KCNN1	med26	ENSORLP00000036930	ENSORLP00000009752	CaMBD domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.584
KCNN1	nxnl1	ENSORLP00000036930	ENSORLP00000042644	CaMBD domain-containing protein.	Nucleoredoxin like 1.	0.593
KCNN1	slc35d1	ENSORLP00000036930	ENSORLP00000034058	CaMBD domain-containing protein.	Solute carrier family 35 member D1a.	0.587
KCNN1	unc13a	ENSORLP00000036930	ENSORLP00000005972	CaMBD domain-containing protein.	Uncharacterized protein.	0.592
LOC101170763	KCNN1	ENSORLP00000012986	ENSORLP00000036930	Transportin 2 (importin 3, karyopherin beta 2b).	CaMBD domain-containing protein.	0.587
LOC101170763	UNC13A	ENSORLP00000012986	ENSORLP00000019046	Transportin 2 (importin 3, karyopherin beta 2b).	Unc-13 homolog A.	0.592
LOC101170763	mast3	ENSORLP00000012986	ENSORLP00000009945	Transportin 2 (importin 3, karyopherin beta 2b).	Microtubule associated serine/threonine kinase 3b.	0.587
LOC101170763	med26	ENSORLP00000012986	ENSORLP00000009752	Transportin 2 (importin 3, karyopherin beta 2b).	TFIIS N-terminal domain-containing protein.	0.621
LOC101170763	nxnl1	ENSORLP00000012986	ENSORLP00000042644	Transportin 2 (importin 3, karyopherin beta 2b).	Nucleoredoxin like 1.	0.585
LOC101170763	slc35d1	ENSORLP00000012986	ENSORLP00000034058	Transportin 2 (importin 3, karyopherin beta 2b).	Solute carrier family 35 member D1a.	0.587
LOC101170763	unc13a	ENSORLP00000012986	ENSORLP00000005972	Transportin 2 (importin 3, karyopherin beta 2b).	Uncharacterized protein.	0.592
TNPO2	KCNN1	ENSORLP00000014744	ENSORLP00000036930	Transportin 2.	CaMBD domain-containing protein.	0.587
TNPO2	TNPO2-2	ENSORLP00000014744	ENSORLP00000030906	Transportin 2.	Transportin 2.	0.946
TNPO2	UNC13A	ENSORLP00000014744	ENSORLP00000019046	Transportin 2.	Unc-13 homolog A.	0.592