STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167744Uncharacterized protein. (2049 aa)    
Predicted Functional Partners:
dlgap3
Discs, large (Drosophila) homolog-associated protein 3.
   
 0.855
LOC101172865
Discs, large (Drosophila) homolog-associated protein 2b.
   
 0.809
dlgap2
Discs, large (Drosophila) homolog-associated protein 2a.
   
 0.809
LOC101160590
Discs, large (Drosophila) homolog-associated protein 1a.
   
 0.809
dlgap1
Discs, large (Drosophila) homolog-associated protein 1b.
   
 0.809
LOC101163007
Uncharacterized protein.
   
 0.798
LOC101173932
Discs, large (Drosophila) homolog-associated protein 4b.
   
 0.798
dlgap5
Discs, large (Drosophila) homolog-associated protein 5.
   
 0.770
HOMER1
Homer scaffold protein 1.
    
 0.753
LOC101163175
Homer scaffold protein 1b.
    
 0.753
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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