STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101172155Si:dkey-238f9.1. (143 aa)    
Predicted Functional Partners:
nxph2
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
    0.529
ENSORLP00000031641
Zgc:153675.
  
     0.528
LOC101170109
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
    0.521
NXPH3
Neurexophilin 3.
  
    0.517
H2MEF6_ORYLA
Melanocortin 4 receptor.
  
     0.517
MFAP3
Microfibril associated protein 3.
  
     0.509
brinp2
Bone morphogenetic protein/retinoic acid inducible neural-specific 2.
  
     0.488
LOC101155878
Protein S100; Belongs to the S-100 family.
  
     0.470
LOC101162995
Bone morphogenetic protein/retinoic acid inducible neural-specific 3a, tandem duplicate 1.
  
    0.466
LOC101156849
Bone morphogenetic protein/retinoic acid inducible neural-specific 3b.
  
    0.463
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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