Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2LVA8_ORYLAUncharacterized protein. (536 aa)    
Predicted Functional Partners:
ENSORLP00000027935
Uncharacterized protein.
 
      0.899
ENSORLP00000028337
Uncharacterized protein.
 
      0.899
ENSORLP00000036671
SH3 domain-containing protein.
 
      0.879
LOC101173369
Junction plakoglobin a.
   
 0.778
LOC101165005
Desmocollin 2 like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.677
itgb4
Integrin beta.
   
 0.658
ENSORLP00000027479
Uncharacterized protein.
 
 
 
 0.565
LOC101170562
Uncharacterized protein.
   
 0.544
LOC101171502
Uncharacterized protein.
   
 0.541
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.541
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.