Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc52a2Solute carrier family 52 member 2. (451 aa)    
Predicted Functional Partners:
gpr137c
G protein-coupled receptor 137c.
      
 0.695
gpr157
G protein-coupled receptor 157.
      
 0.693
slc39a7
Solute carrier family 39 member 7.
      
 0.567
stox1
Storkhead box 1.
      
 0.534
gpr108
G protein-coupled receptor 108.
      
 0.498
adgrv1
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
      
 0.498
H2L6J5_ORYLA
Serine/arginine repetitive matrix 4.
      
 0.464
paqr5
Progestin and adipoQ receptor family member Va.
      
 0.462
LOC101169939
RPGRIP1 like.
      
 0.462
slc17a5
Solute carrier family 17 member 5.
      
 0.429
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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