Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101172996Rab interacting lysosomal protein. (423 aa)    
Predicted Functional Partners:
rab7a
Uncharacterized protein.
    
 0.983
LOC101157689
RAB7a, member RAS oncogene family.
    
 0.983
LOC101165549
Si:dkey-13a21.4.
     
  0.900
LOC101164165
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
     
 0.845
dync1li2
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
     
 0.845
LOC101158306
Dynein, cytoplasmic 1, intermediate chain 2b.
     
  0.821
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
     
  0.821
dync1i2
Dynein, cytoplasmic 1, intermediate chain 2a.
     
  0.821
DYNC2H1
Dynein cytoplasmic 2 heavy chain 1.
     
  0.809
Dync1h1
Dynein, cytoplasmic 1, heavy chain 1.
     
  0.809
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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