Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
prickle2Prickle homolog 2b. (914 aa)    
Predicted Functional Partners:
VANGL2
Vang-like protein.
    
 0.995
VANGL1
VANGL planar cell polarity protein 1.
    
 0.995
dvl2
Dishevelled segment polarity protein 2.
    
 0.988
dvl1
Dishevelled segment polarity protein 1a.
    
 0.978
dvl3
Dishevelled segment polarity protein 3a.
    
 0.975
LOC101170632
Vang-like protein.
    
 0.966
H2M614_ORYLA
ANK_REP_REGION domain-containing protein.
    
 0.786
ankrd6
Ankyrin repeat domain 6b.
    
 0.786
invs
Inversin.
    
 0.761
daam1
Dishevelled associated activator of morphogenesis 1b.
    
 0.741
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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