STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc8b1Solute carrier family 8 member B1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (531 aa)    
Predicted Functional Partners:
Glrx3
Glutaredoxin 3.
   
  
 0.727
utp15
UTP15 small subunit processome component.
      
 0.654
iars2
Isoleucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.628
clybl
Citrate lyase beta like.
     
 0.621
pyroxd2
Pyridine nucleotide-disulphide oxidoreductase domain 2.
      
 0.612
trim44
Tripartite motif containing 44.
   
  
 0.591
oca2
CitMHS domain-containing protein.
  
  
 0.582
LOC101165997
Cytochrome c oxidase assembly homolog 15 (yeast).
      
 0.564
micu1
Mitochondrial calcium uptake 1.
      
 0.558
rmnd1
Required for meiotic nuclear division 1 homolog.
      
 0.555
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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