Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101171851Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family. (197 aa)    
Predicted Functional Partners:
cryaa
Alpha-crystallin A chain; May contribute to the transparency and refractive index of the lens; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.959
LOC101169800
Crystallin, alpha B, a; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.834
BFSP1
Beaded filament structural protein 1; Belongs to the intermediate filament family.
   
  
 0.721
LOC101166967
Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.
   
 
 0.681
c1qtnf5
C1q and TNF related 5.
      
 0.647
bfsp2
Beaded filament structural protein 2, phakinin; Belongs to the intermediate filament family.
   
  
 0.625
LOC101158106
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
  
 0.613
LOC101158659
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
  
 0.613
galk1
Galactokinase 1.
      
 0.600
LOC101173533
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
  
   
 0.599
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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