sltm protein (Oryzias latipes) - STRING interaction network

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Predicted Interactions

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Score

sltm

SAFB-like, transcription modulator. (960 aa)

Predicted Functional Partners:

fau

0.629

NCBP1

0.550

ncbp2

0.548

H2M255_ORYLA

0.513

LOC101165683

0.513

ENSORLP00000045060

0.513

snrpg

0.512

snrpe

0.507

sf3b1

0.498

eif2s3

0.495

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000045060	H2M255_ORYLA	ENSORLP00000045060	ENSORLP00000012494	RRM domain-containing protein.	RNA binding motif protein 25a.	0.900
ENSORLP00000045060	NCBP1	ENSORLP00000045060	ENSORLP00000026641	RRM domain-containing protein.	Nuclear cap binding protein subunit 1.	0.871
ENSORLP00000045060	ncbp2	ENSORLP00000045060	ENSORLP00000014087	RRM domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.881
ENSORLP00000045060	sf3b1	ENSORLP00000045060	ENSORLP00000025076	RRM domain-containing protein.	Splicing factor 3b, subunit 1.	0.833
ENSORLP00000045060	sltm	ENSORLP00000045060	ENSORLP00000010249	RRM domain-containing protein.	SAFB-like, transcription modulator.	0.513
ENSORLP00000045060	snrpe	ENSORLP00000045060	ENSORLP00000029192	RRM domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.641
ENSORLP00000045060	snrpg	ENSORLP00000045060	ENSORLP00000030086	RRM domain-containing protein.	Small nuclear ribonucleoprotein G.	0.730
H2M255_ORYLA	ENSORLP00000045060	ENSORLP00000012494	ENSORLP00000045060	RNA binding motif protein 25a.	RRM domain-containing protein.	0.900
H2M255_ORYLA	LOC101165683	ENSORLP00000012494	ENSORLP00000014878	RNA binding motif protein 25a.	RNA binding motif protein 25b.	0.900
H2M255_ORYLA	NCBP1	ENSORLP00000012494	ENSORLP00000026641	RNA binding motif protein 25a.	Nuclear cap binding protein subunit 1.	0.871
H2M255_ORYLA	ncbp2	ENSORLP00000012494	ENSORLP00000014087	RNA binding motif protein 25a.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.881
H2M255_ORYLA	sf3b1	ENSORLP00000012494	ENSORLP00000025076	RNA binding motif protein 25a.	Splicing factor 3b, subunit 1.	0.833
H2M255_ORYLA	sltm	ENSORLP00000012494	ENSORLP00000010249	RNA binding motif protein 25a.	SAFB-like, transcription modulator.	0.513
H2M255_ORYLA	snrpe	ENSORLP00000012494	ENSORLP00000029192	RNA binding motif protein 25a.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.641
H2M255_ORYLA	snrpg	ENSORLP00000012494	ENSORLP00000030086	RNA binding motif protein 25a.	Small nuclear ribonucleoprotein G.	0.730
LOC101165683	H2M255_ORYLA	ENSORLP00000014878	ENSORLP00000012494	RNA binding motif protein 25b.	RNA binding motif protein 25a.	0.900
LOC101165683	NCBP1	ENSORLP00000014878	ENSORLP00000026641	RNA binding motif protein 25b.	Nuclear cap binding protein subunit 1.	0.871
LOC101165683	ncbp2	ENSORLP00000014878	ENSORLP00000014087	RNA binding motif protein 25b.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.881
LOC101165683	sf3b1	ENSORLP00000014878	ENSORLP00000025076	RNA binding motif protein 25b.	Splicing factor 3b, subunit 1.	0.833
LOC101165683	sltm	ENSORLP00000014878	ENSORLP00000010249	RNA binding motif protein 25b.	SAFB-like, transcription modulator.	0.513