STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162575Cytochrome P450, family 4, subfamily V, polypeptide 8; Belongs to the cytochrome P450 family. (516 aa)    
Predicted Functional Partners:
LOC101166486
NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
 
  
 
 0.919
sqle
Squalene epoxidase a.
  
 0.729
LOC101161165
Phosphoethanolamine methyltransferase.
   
 0.675
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.670
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 0.608
LSS
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 0.604
LOC101157258
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 0.604
fbh1
F-box DNA helicase 1.
      
 0.558
LOC101157414
Adenylate kinase 7a.
      
 0.535
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
    
 
 0.514
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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