Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
c17h7orf25Zgc:55781. (416 aa)    
Predicted Functional Partners:
psma2
Proteasome subunit alpha type.
 
    
 0.858
sec61g
SEC61 translocon gamma subunit.
      
 0.754
blvra
Biliverdin reductase A.
      
 0.693
wdr83
WD repeat domain containing 83.
 
 
    0.669
hyi
Putative hydroxypyruvate isomerase; Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde); Belongs to the hyi family.
      
 0.613
dpcd
Deleted in primary ciliary dyskinesia homolog (mouse).
      
 0.604
mrps24
Mitochondrial ribosomal protein S24.
      
 0.534
LOC101163818
Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily.
      
 0.509
stk17b
Serine/threonine kinase 17b (apoptosis-inducing); Belongs to the protein kinase superfamily.
      
 0.509
nrbf2
Nuclear receptor binding factor 2b.
      
 0.505
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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