STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101155862Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4a. (241 aa)    
Predicted Functional Partners:
LOC101160197
E1A binding protein p300 a.
    
 0.836
LOC101168870
E1A binding protein p300 b.
    
 0.836
adcy9
CREB binding protein b.
    
 0.825
LOC101163392
CREB binding protein a.
    
 0.825
tfap2d
Transcription factor AP-2 delta (activating enhancer binding protein 2 delta).
    
 0.616
H2MZX5_ORYLA
Centromere protein P.
    
 0.606
tfap2a
Transcription factor AP-2 alpha.
    
 0.498
tfap2b
Transcription factor AP-2 beta.
    
 0.498
LOC101167699
Transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma).
    
 0.498
tfap2e
Transcription factor AP-2 epsilon.
    
 0.498
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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