STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170879Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)    
Predicted Functional Partners:
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.998
rpl4
Ribosomal protein L4.
  
 0.998
rpl30
Ribosomal protein L30.
   
 0.998
fau
40S ribosomal protein S30.
   
 0.998
rpl34
Ribosomal protein L34.
  
 0.998
rpl21
Ribosomal protein L21.
   
 0.998
rpl18a
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
 
 
 0.998
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
  
 0.997
rpl27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
  
 0.997
rpl28
Ribosomal protein L28.
   
 0.997
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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