Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Zbtb49Zinc finger and BTB domain containing 49. (426 aa)    
Predicted Functional Partners:
ENSORLP00000036351
Uncharacterized protein.
 
     0.921
LOC105354844
Uncharacterized protein.
  
   
 0.674
elp2
Elongator acetyltransferase complex subunit 2.
    
 0.628
nup58
Nucleoporin 58.
    
 
 0.622
ccdc149
Coiled-coil domain containing 149a.
      
 0.582
LOC101172128
Coiled-coil domain containing 149b.
      
 0.582
NSG1
Neuronal vesicle trafficking associated 1.
      
 0.565
pacrg
PARK2 co-regulated.
    
 
 0.557
msc
Musculin (activated B-cell factor-1).
    
 
 0.542
tmem128
Transmembrane protein 107.
      
 0.535
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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