STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101165337Uncharacterized protein. (1418 aa)    
Predicted Functional Partners:
LOC101162066
Uncharacterized protein.
  
  
 
0.900
LOC101167488
ATP-binding cassette, sub-family G (WHITE), member 2a.
  
 0.643
LOC101170649
ATP-binding cassette, sub-family G (WHITE), member 2d.
  
 0.643
LOC101164130
ATP-binding cassette, sub-family G (WHITE), member 2c.
  
0.643
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.567
gopc
Golgi-associated PDZ and coiled-coil motif containing.
   
 0.510
nup210
Nucleoporin 210.
   
  
 0.491
usp10
Ubiquitin carboxyl-terminal hydrolase.
    
  0.486
spata5l1
Spermatogenesis associated 5-like 1.
   
 0.475
vcp
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.475
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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