Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101160740Si:ch211-166a6.5. (1381 aa)    
Predicted Functional Partners:
dlst
Dihydrolipoamide S-succinyltransferase.
   
   0.653
pum1
Pumilio RNA-binding family member 1.
    
   0.599
pum2
Pumilio 2.
    
   0.599
ppp1r13l
Protein phosphatase 1, regulatory subunit 13 like.
      
 0.583
usp10
Ubiquitin carboxyl-terminal hydrolase.
    
   0.509
TCERG1
Transcription elongation regulator 1.
    
   0.503
ercc2
Excision repair cross-complementation group 2.
   
   0.493
eif3b
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
 0.438
pink1
PTEN induced kinase 1.
    
 
 0.438
hdlbp
High density lipoprotein binding protein a.
   
   0.433
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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