STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101164089Fatty acid binding protein 11b; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (134 aa)    
Predicted Functional Partners:
LOC101160985
Fatty acid binding protein 1b, tandem duplicate 1.
   
 
 0.659
LOC101169065
Fatty acid binding protein 6, ileal (gastrotropin).
   
 
 0.656
TMC6
Transmembrane channel-like protein.
     
 0.568
tcte1
T-complex-associated-testis-expressed 1.
      
 0.568
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.548
LOC101174359
Cor1 domain-containing protein.
      
 0.505
ppard
Uncharacterized protein.
    
 0.480
npc2
Niemann-Pick disease, type C2.
   
  
 0.479
alv
Metalloendopeptidase.
      
 0.458
FABP6
Fatty acid binding protein 6.
      
 0.438
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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