STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dazap1DAZ associated protein 1. (435 aa)    
Predicted Functional Partners:
LOC101160053
G-rich RNA sequence binding factor 1.
   
 0.780
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
   
 
 0.748
zc3h14
Zinc finger CCCH-type containing 14.
    
 
 0.742
LOC101155211
Serine and arginine rich splicing factor 7a.
     
 0.736
dab2
DAB adaptor protein 2.
      
 0.733
hnrnph1
Heterogeneous nuclear ribonucleoprotein H1.
   
 0.729
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
   
 0.729
oard1
O-acyl-ADP-ribose deacylase 1.
    
   0.701
rbm47
RNA binding motif protein 47.
   
 0.701
Pex2
Peroxisomal biogenesis factor 2.
      
 0.692
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.