Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cutcCutC copper transporter homolog (E. coli). (251 aa)    
Predicted Functional Partners:
nadsyn1
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
    
   0.879
atox1
Antioxidant 1 copper chaperone.
      
 0.708
egfl7
EGF-like-domain, multiple 7.
      
 0.656
LOC101174485
Uncharacterized protein.
      
 0.642
PCDH20
Protocadherin 20.
      
 0.630
SHC3
SHC adaptor protein 3.
      
 0.619
phf23
PHD finger protein 23b.
      
 0.619
Rad51c
RAD51 paralog C.
      
 0.601
commd1
Copper metabolism (Murr1) domain containing 1.
      
 0.547
slc30a7
Solute carrier family 30 member 7.
  
  
 0.545
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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