Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2LWC6_ORYLAUncharacterized protein. (260 aa)    
Predicted Functional Partners:
olfml3
Olfactomedin-like 3b.
   
  
 0.924
p2ry12
Purinergic receptor P2Y12.
   
  
 0.779
LOC101161673
Apolipoprotein Eb.
      
 0.768
AXL
AXL receptor tyrosine kinase.
      
 0.741
LOC101170982
Uncharacterized protein.
      
 0.737
CST7
Cystatin F.
      
 0.718
gpnmb
Glycoprotein (transmembrane) nmb.
      
 0.716
LOC101168287
Colony stimulating factor 1b (macrophage).
      
 0.716
AIF1
Allograft inflammatory factor 1.
   
  
 0.696
tspo
Translocator protein.
      
 0.693
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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