STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LWC6_ORYLAUncharacterized protein. (260 aa)    
Predicted Functional Partners:
AXL
AXL receptor tyrosine kinase.
      
 0.622
galc
Galactosylceramidase b.
      
 0.590
p2ry12
Purinergic receptor P2Y12.
      
 0.560
LOC101161673
Apolipoprotein Eb.
      
 0.559
CST7
Cystatin F.
      
 0.558
tyrobp
Uncharacterized protein.
      
 0.558
TCF4
Transcription factor 4.
      
 0.506
LOC101163826
Synapsin I.
      
 0.503
LOC101168118
MARVEL domain-containing protein.
      
 0.503
LOC101160211
Synaptophysin a.
      
 0.503
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.