Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101165997Cytochrome c oxidase assembly homolog 15 (yeast). (406 aa)    
Predicted Functional Partners:
LOC101161443
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
  
 0.999
LOC101163261
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
  
 0.983
LOC101162329
Cytochrome c oxidase assembly factor COX16.
     
 0.983
clcc1
Uncharacterized protein.
  
 0.958
LOC101163528
Cytochrome C oxidase assembly factor 3a.
    
 0.955
H2N085_ORYLA
SCO cytochrome c oxidase assembly protein 2.
  
 0.937
LOC101175404
SCO cytochrome c oxidase assembly protein 1.
  
 0.927
LOC101168000
Cytochrome C oxidase assembly factor 5.
     
 0.926
COX3
Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex.
  
 
 0.925
LOC101159951
Cytochrome c oxidase assembly homolog 11 (yeast).
  
 0.923
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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