STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem185aTransmembrane protein 185. (352 aa)    
Predicted Functional Partners:
pmpcb
Peptidase (mitochondrial processing) beta; Belongs to the peptidase M16 family.
 
      0.843
LOC101157209
Ubiquinol-cytochrome c reductase core protein 1.
 
      0.794
gpr157
G protein-coupled receptor 157.
      
 0.487
eif4enif1
Eukaryotic translation initiation factor 4E transporter.
      
 0.483
gpr108
G protein-coupled receptor 108.
      
 0.459
GPR149
G protein-coupled receptor 149.
    
 
 0.455
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.