STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pnmtUncharacterized protein. (115 aa)    
Predicted Functional Partners:
PNMT
Phenylethanolamine N-methyltransferase.
 
      0.899
ENSORLP00000036355
Uncharacterized protein.
      
 0.659
hsf2bp
Heat shock transcription factor 2 binding protein.
      
 0.654
sp1
Sp1 transcription factor.
      
 0.621
th
Tyrosine hydroxylase 1.
      
 0.620
ENSORLP00000036037
Uncharacterized protein; Belongs to the heat shock protein 70 family.
      
 0.610
LOC101169083
Monooxygenase, DBH-like 1, like.
   
 
 0.580
dbh
Dopamine beta-hydroxylase (dopamine beta-monooxygenase).
   
 
 0.580
agmo
Alkylglycerol monooxygenase; Belongs to the sterol desaturase family.
      
 0.569
pah
Phenylalanine hydroxylase.
      
 0.540
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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