STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LWG8_ORYLATroponin I type 1a (skeletal, slow). (165 aa)    
Predicted Functional Partners:
LOC101171829
Troponin C type 2 (fast).
   
 0.991
TNNT1
Troponin T1, slow skeletal type.
  
 0.990
LOC101166305
Troponin T type 1 (skeletal, slow).
  
 0.989
LOC101171577
Si:rp71-17i16.4.
   
 0.987
LOC101157127
Troponin T type 3a (skeletal, fast).
  
 0.984
LOC105354378
Troponin T type 2a (cardiac).
  
 0.982
LOC101160231
Uncharacterized protein.
  
 0.977
LOC101158987
Uncharacterized protein.
  
 0.976
H2MP59_ORYLA
Troponin T2c, cardiac.
  
 0.976
LOC101171215
Troponin C type 1b (slow).
   
 0.975
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (20%) [HD]