Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
gdap2Ganglioside induced differentiation associated protein 2. (495 aa)    
Predicted Functional Partners:
LOC101164280
Protein tyrosine phosphatase non-receptor type 9b.
      
 0.700
spag17
Uncharacterized protein.
      
 0.699
ptpn9
Protein tyrosine phosphatase non-receptor type 9a.
      
 0.699
macrod2
Macro domain-containing protein.
  
   
0.667
macrod1
Mono-ADP ribosylhydrolase 1.
  
   
0.661
H2LWA8_ORYLA
Utp12 domain-containing protein.
      
 0.651
Wdr3
Uncharacterized protein.
      
 0.651
LOC111946735
Ig-like domain-containing protein.
      
 0.612
cd2bp2
CD2 (cytoplasmic tail) binding protein 2.
      
 0.602
tshz3
Teashirt zinc finger homeobox 3b.
      
 0.598
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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