Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101162549Prominin 2. (837 aa)    
Predicted Functional Partners:
LOC101154795
Homeobox domain-containing protein.
      
 0.787
ENSORLP00000032568
Fibroblast growth factor binding protein 1b.
      
 0.604
mpp5
Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.
      
 0.486
MPP5
Membrane palmitoylated protein 5; Belongs to the MAGUK family.
      
 0.486
hopx
Homeobox domain-containing protein.
      
 0.480
LOC101160554
Anoctamin.
      
 0.474
ifngr1l
Fibronectin type-III domain-containing protein.
      
 0.464
ipo11
Importin 11.
      
 0.464
slc25a16
Solute carrier family 25 member 16; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.464
mtf1
Metal-regulatory transcription factor 1.
      
 0.462
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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