Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
arfip1ADP-ribosylation factor interacting protein 1 (arfaptin 1). (468 aa)    
Predicted Functional Partners:
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.815
H2MN86_ORYLA
ADP-ribosylation factor 6b.
    
 0.782
LOC105355060
Uncharacterized protein.
    
 0.729
ENSORLP00000040659
Uncharacterized protein.
    
 0.729
ccdc186
Si:ch211-225b10.4.
      
 0.593
ociad2
OCIA domain containing 2.
      
 0.585
arl15
ADP-ribosylation factor-like 15a.
    
 0.510
Arl14
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.510
tmem154
Uncharacterized protein.
      
 0.508
LOC105354522
Rac family small GTPase 3b.
    
 0.502
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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