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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dgcr2DiGeorge syndrome critical region gene 2. (527 aa)    
Predicted Functional Partners:
ess2
Ess-2 splicing factor homolog.
 
    
 0.737
kansl2
KAT8 regulatory NSL complex subunit 2.
      
 0.558
ppm1f
Protein phosphatase, Mg2+/Mn2+ dependent, 1F.
      
 0.558
ZNF830
Zinc finger protein 830.
      
 0.558
ascc2
Activating signal cointegrator 1 complex subunit 2.
      
 0.558
crnkl1
Crooked neck pre-mRNA splicing factor 1.
      
 0.558
LOC101162764
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
      
 0.526
H2M6E4_ORYLA
Uncharacterized protein.
    
 0.520
LOC101165932
Intersectin 2a.
    
 0.520
ENSORLP00000034742
Uncharacterized protein.
    
 0.520
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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