STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ripk2Receptor-interacting serine-threonine kinase 2. (590 aa)    
Predicted Functional Partners:
nod1
Nucleotide-binding oligomerization domain containing 1.
   
 0.993
nod2
Nucleotide-binding oligomerization domain containing 2.
   
 0.993
LOC101166883
X-linked inhibitor of apoptosis.
   
 0.991
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.988
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.977
LOC101172600
Baculoviral IAP repeat containing 2.
   
 0.971
tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1.
  
 0.971
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.966
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
   
 0.960
LOC101170323
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.954
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.