Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101160233 | LOC101161482 | ENSORLP00000027536 | ENSORLP00000006705 | Tight junction protein 1b; Belongs to the MAGUK family. | Uncharacterized protein. | 0.900 |
LOC101160233 | LOC101166369 | ENSORLP00000027536 | ENSORLP00000029048 | Tight junction protein 1b; Belongs to the MAGUK family. | Tight junction protein 1a; Belongs to the MAGUK family. | 0.903 |
LOC101160233 | cgnl1 | ENSORLP00000027536 | ENSORLP00000010569 | Tight junction protein 1b; Belongs to the MAGUK family. | Cingulin-like 1. | 0.926 |
LOC101161482 | LOC101160233 | ENSORLP00000006705 | ENSORLP00000027536 | Uncharacterized protein. | Tight junction protein 1b; Belongs to the MAGUK family. | 0.900 |
LOC101161482 | LOC101166369 | ENSORLP00000006705 | ENSORLP00000029048 | Uncharacterized protein. | Tight junction protein 1a; Belongs to the MAGUK family. | 0.900 |
LOC101161482 | arhgef2 | ENSORLP00000006705 | ENSORLP00000025918 | Uncharacterized protein. | Rho/rac guanine nucleotide exchange factor (GEF) 2. | 0.900 |
LOC101161482 | cgnl1 | ENSORLP00000006705 | ENSORLP00000010569 | Uncharacterized protein. | Cingulin-like 1. | 0.907 |
LOC101166369 | LOC101160233 | ENSORLP00000029048 | ENSORLP00000027536 | Tight junction protein 1a; Belongs to the MAGUK family. | Tight junction protein 1b; Belongs to the MAGUK family. | 0.903 |
LOC101166369 | LOC101161482 | ENSORLP00000029048 | ENSORLP00000006705 | Tight junction protein 1a; Belongs to the MAGUK family. | Uncharacterized protein. | 0.900 |
LOC101166369 | cgnl1 | ENSORLP00000029048 | ENSORLP00000010569 | Tight junction protein 1a; Belongs to the MAGUK family. | Cingulin-like 1. | 0.926 |
TRAPPC5 | cgnl1 | ENSORLP00000028987 | ENSORLP00000010569 | Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | Cingulin-like 1. | 0.757 |
TRAPPC5 | lca5 | ENSORLP00000028987 | ENSORLP00000035239 | Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | Lebercilin LCA5. | 0.977 |
TRAPPC5 | trappc2 | ENSORLP00000028987 | ENSORLP00000039918 | Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | Trafficking protein particle complex 2. | 0.999 |
TRAPPC5 | trappc4 | ENSORLP00000028987 | ENSORLP00000016416 | Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. | 0.999 |
TRAPPC5 | trappc6b | ENSORLP00000028987 | ENSORLP00000035911 | Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | Trafficking protein particle complex 6b. | 0.999 |
TRAPPC5 | trappc8 | ENSORLP00000028987 | ENSORLP00000000151 | Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. | Trafficking protein particle complex 8. | 0.999 |
arhgef2 | LOC101161482 | ENSORLP00000025918 | ENSORLP00000006705 | Rho/rac guanine nucleotide exchange factor (GEF) 2. | Uncharacterized protein. | 0.900 |
arhgef2 | cgnl1 | ENSORLP00000025918 | ENSORLP00000010569 | Rho/rac guanine nucleotide exchange factor (GEF) 2. | Cingulin-like 1. | 0.954 |
cgnl1 | LOC101160233 | ENSORLP00000010569 | ENSORLP00000027536 | Cingulin-like 1. | Tight junction protein 1b; Belongs to the MAGUK family. | 0.926 |
cgnl1 | LOC101161482 | ENSORLP00000010569 | ENSORLP00000006705 | Cingulin-like 1. | Uncharacterized protein. | 0.907 |
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