Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zdhhc6Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (412 aa)    
Predicted Functional Partners:
pigb
Mannosyltransferase.
      
 0.914
tmem161a
Transmembrane protein 161A.
      
 0.914
tmem53
Transmembrane protein 53.
      
 0.914
ogfod3
Urotensin-2 receptor 2.
      
 0.914
dgke
Diacylglycerol kinase.
      
 0.763
tmem209
Transmembrane protein 209.
      
 0.739
ccdc186
Si:ch211-225b10.4.
      
 0.716
plekhs1
PH domain-containing protein.
      
 0.716
nhlrc2
NHL repeat containing 2.
      
 0.694
dclre1a
C2H2-type domain-containing protein.
   
  
 0.692
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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