STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lgr6Leucine-rich repeat-containing G protein-coupled receptor 6. (928 aa)    
Predicted Functional Partners:
rspo1
Uncharacterized protein.
    
 0.978
rspo3
R-spondin-3.
    
 0.947
rspo2
R-spondin-2.
    
 0.941
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
  
0.930
lgr5
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
0.928
fshb
Cys_knot domain-containing protein.
   
 0.717
lrr1
Zgc:77287.
  
 0.610
LOC101162593
E74-like factor 3 (ets domain transcription factor, epithelial-specific ).
      
 0.575
LOC101169098
ADP-ribosylation factor-like 8A; Belongs to the small GTPase superfamily. Arf family.
      
 0.569
LOC101171658
Thyroid stimulating hormone subunit beta a.
    
 0.555
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.