STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ube2tUbiquitin-conjugating enzyme E2T (putative). (173 aa)    
Predicted Functional Partners:
fancl
FA complementation group L.
   
 0.999
fanci
FA complementation group I.
   
 0.998
LOC101172571
FA complementation group D2.
   
 0.997
fancf
FA complementation group F.
    
 0.994
fancc
FA complementation group C.
    
 0.994
fancg
Uncharacterized protein.
   
 0.992
fancb
FA complementation group B.
    
 0.990
faap24
FA core complex associated protein 24.
     
 0.987
faap100
Si:dkey-57h18.1.
    
 0.986
fancm
Uncharacterized protein.
    
 0.979
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.