STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sgk3Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (492 aa)    
Predicted Functional Partners:
pdpk1
3-phosphoinositide dependent protein kinase 1b.
    
0.983
vcpip1
Valosin containing protein (p97)/p47 complex interacting protein 1.
      
 0.858
adhfe1
Alcohol dehydrogenase iron containing 1.
    
 
 0.812
PDE7B
Phosphodiesterase.
    
 0.793
rictor
RPTOR independent companion of MTOR, complex 2 a.
    
 0.756
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.750
mapkap1
MAPK associated protein 1.
    
 0.742
rps6
Ribosomal protein S6.
    
 0.728
foxo3
Forkhead box O5.
   
 0.703
LOC101164740
Fork-head domain-containing protein.
    
 0.697
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.