STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101156654Ets variant 7. (393 aa)    
Predicted Functional Partners:
tfb2m
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
      
 0.914
ETV6
ETS variant 6.
    
 
 0.895
dot1l
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
      
 0.864
med8
Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
      
 0.760
LOC101159619
Calpain 15; Belongs to the peptidase C2 family.
     
 0.717
LOC101157134
Uncharacterized protein; Belongs to the peptidase C2 family.
     
 0.717
LOC101166514
ATP synthase inhibitory factor subunit 1b.
      
 0.691
ENSORLP00000027583
ETS domain-containing protein.
    
 
 0.666
LOC101159690
V-ets avian erythroblastosis virus E26 oncogene homolog 1.
    
 
 0.666
raf1
Raf-1 proto-oncogene, serine/threonine kinase a.
    
 0.524
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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