STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ogaO-GlcNAcase. (915 aa)    
Predicted Functional Partners:
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
   
 
 0.648
dda1
DET1 and DDB1 associated 1.
      
 0.633
cant1
Calcium activated nucleotidase 1a.
      
 0.616
tk1
Thymidine kinase.
   
  
 0.615
uap1
UDP-N-acetylglucosamine pyrophosphorylase 1.
      
 0.603
ddb1
Damage-specific DNA binding protein 1.
      
 0.589
pprc1
PPARG related coactivator 1.
 
    
 0.586
CRTC2
CREB regulated transcription coactivator 2.
      
 0.526
sec31a
SEC31 homolog A, COPII coat complex component.
      
 0.503
LOC101158550
Nucleophosmin 1a.
   
 
 0.463
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.