STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101157775Potassium voltage-gated channel subfamily A member 2; Belongs to the potassium channel family. (495 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30.
   
  0.817
LOC101170669
Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.601
rpl30
Ribosomal protein L30.
   
 0.579
rpl21
Ribosomal protein L21.
   
 0.579
rpl31
Ribosomal protein L31.
   
 0.578
rpl34
Ribosomal protein L34.
  
 0.578
rpl29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.578
rpl13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.566
kcnab2
Potassium voltage-gated channel, shaker-related subfamily, beta member 2 a.
   
 0.565
rpl24
Ribosomal protein L24.
   
 0.562
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.