LOC101173540 protein (Oryzias latipes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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co-expression

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[Homology]

Score

LOC101173540

Cd8 beta. (210 aa)

Predicted Functional Partners:

LOC100125537

0.978

orla-uba

0.762

orla-uaa

0.762

LOC100125525

0.714

H2L5U7_ORYLA

0.650

LOC101175416

0.650

LOC101154961

0.650

LOC101169825

0.650

LOC101170062

0.650

orla-uha

0.650

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2L5U7_ORYLA	LOC100125537	ENSORLP00000001184	ENSORLP00000032993	Ig-like domain-containing protein; Belongs to the MHC class I family.	Uncharacterized protein.	0.731
H2L5U7_ORYLA	LOC101173540	ENSORLP00000001184	ENSORLP00000010674	Ig-like domain-containing protein; Belongs to the MHC class I family.	Cd8 beta.	0.650
LOC100125525	LOC100125537	ENSORLP00000015999	ENSORLP00000032993	Uncharacterized protein.	Uncharacterized protein.	0.740
LOC100125525	LOC101169825	ENSORLP00000015999	ENSORLP00000015540	Uncharacterized protein.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.405
LOC100125525	LOC101170062	ENSORLP00000015999	ENSORLP00000015544	Uncharacterized protein.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.405
LOC100125525	LOC101173540	ENSORLP00000015999	ENSORLP00000010674	Uncharacterized protein.	Cd8 beta.	0.714
LOC100125525	orla-uaa	ENSORLP00000015999	ENSORLP00000008515	Uncharacterized protein.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.405
LOC100125525	orla-uba	ENSORLP00000015999	ENSORLP00000008513	Uncharacterized protein.	Classical MHC class I molecule, alpha-chain; Belongs to the MHC class I family.	0.405
LOC100125525	orla-uha	ENSORLP00000015999	ENSORLP00000021462	Uncharacterized protein.	Nonclassical MHC class I molecule, alpha chain; Belongs to the MHC class I family.	0.405
LOC100125537	H2L5U7_ORYLA	ENSORLP00000032993	ENSORLP00000001184	Uncharacterized protein.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.731
LOC100125537	LOC100125525	ENSORLP00000032993	ENSORLP00000015999	Uncharacterized protein.	Uncharacterized protein.	0.740
LOC100125537	LOC101154961	ENSORLP00000032993	ENSORLP00000001320	Uncharacterized protein.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.731
LOC100125537	LOC101169825	ENSORLP00000032993	ENSORLP00000015540	Uncharacterized protein.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.898
LOC100125537	LOC101170062	ENSORLP00000032993	ENSORLP00000015544	Uncharacterized protein.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.898
LOC100125537	LOC101173540	ENSORLP00000032993	ENSORLP00000010674	Uncharacterized protein.	Cd8 beta.	0.978
LOC100125537	LOC101175416	ENSORLP00000032993	ENSORLP00000001303	Uncharacterized protein.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.731
LOC100125537	orla-uaa	ENSORLP00000032993	ENSORLP00000008515	Uncharacterized protein.	Ig-like domain-containing protein; Belongs to the MHC class I family.	0.898
LOC100125537	orla-uba	ENSORLP00000032993	ENSORLP00000008513	Uncharacterized protein.	Classical MHC class I molecule, alpha-chain; Belongs to the MHC class I family.	0.898
LOC100125537	orla-uha	ENSORLP00000032993	ENSORLP00000021462	Uncharacterized protein.	Nonclassical MHC class I molecule, alpha chain; Belongs to the MHC class I family.	0.898
LOC101154961	LOC100125537	ENSORLP00000001320	ENSORLP00000032993	Ig-like domain-containing protein; Belongs to the MHC class I family.	Uncharacterized protein.	0.731