rarb protein (Oryzias latipes) - STRING interaction network

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[Homology]

Score

rarb

Retinoic acid receptor beta. (478 aa)

Predicted Functional Partners:

med1

0.777

nrip1

0.707

ncor1

0.655

ncor2

0.655

LOC100125506

0.621

LOC100125533

0.621

RXRB

0.621

rxra

0.621

ncoa6

0.584

psmc5

0.576

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100125506	med1	ENSORLP00000008821	ENSORLP00000043584	Retinoid x receptor, beta b.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.845
LOC100125506	ncoa6	ENSORLP00000008821	ENSORLP00000032744	Retinoid x receptor, beta b.	Nuclear receptor coactivator 6.	0.777
LOC100125506	ncor1	ENSORLP00000008821	ENSORLP00000015017	Retinoid x receptor, beta b.	Nuclear receptor corepressor 1.	0.823
LOC100125506	ncor2	ENSORLP00000008821	ENSORLP00000017559	Retinoid x receptor, beta b.	Nuclear receptor corepressor 2.	0.823
LOC100125506	nrip1	ENSORLP00000008821	ENSORLP00000000720	Retinoid x receptor, beta b.	Nuclear receptor interacting protein 1b.	0.521
LOC100125506	rarb	ENSORLP00000008821	ENSORLP00000010679	Retinoid x receptor, beta b.	Retinoic acid receptor beta.	0.621
LOC100125506	rxra	ENSORLP00000008821	ENSORLP00000036590	Retinoid x receptor, beta b.	Retinoid X receptor, alpha a.	0.908
LOC100125533	med1	ENSORLP00000020880	ENSORLP00000043584	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.845
LOC100125533	ncoa6	ENSORLP00000020880	ENSORLP00000032744	Uncharacterized protein.	Nuclear receptor coactivator 6.	0.777
LOC100125533	ncor1	ENSORLP00000020880	ENSORLP00000015017	Uncharacterized protein.	Nuclear receptor corepressor 1.	0.823
LOC100125533	ncor2	ENSORLP00000020880	ENSORLP00000017559	Uncharacterized protein.	Nuclear receptor corepressor 2.	0.823
LOC100125533	nrip1	ENSORLP00000020880	ENSORLP00000000720	Uncharacterized protein.	Nuclear receptor interacting protein 1b.	0.521
LOC100125533	rarb	ENSORLP00000020880	ENSORLP00000010679	Uncharacterized protein.	Retinoic acid receptor beta.	0.621
RXRB	med1	ENSORLP00000032690	ENSORLP00000043584	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.845
RXRB	ncoa6	ENSORLP00000032690	ENSORLP00000032744	Uncharacterized protein.	Nuclear receptor coactivator 6.	0.777
RXRB	ncor1	ENSORLP00000032690	ENSORLP00000015017	Uncharacterized protein.	Nuclear receptor corepressor 1.	0.823
RXRB	ncor2	ENSORLP00000032690	ENSORLP00000017559	Uncharacterized protein.	Nuclear receptor corepressor 2.	0.823
RXRB	nrip1	ENSORLP00000032690	ENSORLP00000000720	Uncharacterized protein.	Nuclear receptor interacting protein 1b.	0.521
RXRB	rarb	ENSORLP00000032690	ENSORLP00000010679	Uncharacterized protein.	Retinoic acid receptor beta.	0.621
med1	LOC100125506	ENSORLP00000043584	ENSORLP00000008821	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Retinoid x receptor, beta b.	0.845