Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101161581Diencephalon/mesencephalon homeobox 1a. (389 aa)    
Predicted Functional Partners:
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
    
   0.600
themis2
Thymocyte selection associated family member 2.
      
 0.524
TMEM43
Uncharacterized protein.
      
 0.523
nfkbid
ANK_REP_REGION domain-containing protein.
    
 
 0.522
fbxl5
F-box and leucine-rich repeat protein 5.
      
 0.521
pik3ip1
Phosphoinositide-3-kinase interacting protein 1.
      
 0.503
LOC101159378
Iroquois homeobox 4a.
    
 
 0.492
bahd1
Bromo adjacent homology domain containing 1.
      
 0.491
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 
 0.482
Glrx3
Glutaredoxin 3.
      
 0.475
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.