STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101161884Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (545 aa)    
Predicted Functional Partners:
LOC101171815
Solute carrier family 5 member 7a; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 
0.903
LOC101160945
Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 
0.903
SETD4
SET domain containing 4.
   
  
 0.600
LOC101168178
Solute carrier family 5 member 6; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
   
 0.509
ppp1r11
Protein phosphatase 1, regulatory (inhibitor) subunit 11.
      
 0.462
LOC101161492
Protocadherin 11.
      
 0.432
pcdh9
Protocadherin 9.
      
 0.432
LOC101163117
MFS domain-containing protein.
   
  
 0.431
ENSORLP00000042734
Solute carrier family 18 member 3a.
   
  
 0.431
st6gal2
Beta-galactoside alpha-2,6-sialyltransferase 2; Transfers sialic acid from the donor of substrate CMP-sialic acid to galactose containing acceptor substrates.
      
 0.419
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.